Stem-loop dps-mir-308

Accession

MI0001353

Description

Drosophila pseudoobscura dps-mir-308 precursor miRNA

Sequence

2186 reads, 29.0 reads per million, 20 experiments

cuCGCAGUAUAUUUUUGUGUUUUGuugugucugaaacgcaAAUCACAGGAUUAUACUGUGAG
(((((((((((.(((((((.(((((.((.......))))))).))))))).)))))))))))

Structure

           U       U     u  gu 
cuCGCAGUAUA UUUUGUG UUUGu gu  c
||||||||||| ||||||| ||||| ||  u
GAGUGUCAUAU AGGACAC AAacg ca  g
           U       U     -  aa 

Annotation confidence High

Genome context

ref|NC_046680.1|: 20082201-20082262 [-]

Mature dps-miR-308-5p

• Accession: MIMAT0053413
• Description: Drosophila pseudoobscura dps-miR-308-5p mature miRNA
• Sequence: 3 - CGCAGUAUAUUUUUGUGUUUUG - 24
• Evidence: experimental ; Illumina [1]

Mature dps-miR-308-3p

• Accession: MIMAT0001258
• Description: Drosophila pseudoobscura dps-miR-308-3p mature miRNA
• Sequence: 41 - AAUCACAGGAUUAUACUGUGAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9