Stem-loop bta-mir-23b

Accession

MI0005066

Description

Bos taurus bta-mir-23b precursor miRNA

Literature search

16 open access papers mention bta-mir-23b
(37 sentences)

Sequence

82339 reads, 733 reads per million, 75 experiments

GGGUUCCUGGCAUGCUGAUUUgugacuuaagauuaaaAUCACAUUGCCAGGGAUUACCAC
((((((((((((((.((((((..............)))))))).))))))))))..))..

Structure

--  --          -  C      gugacu 
  GG  GUUCCUGGCA UG UGAUUU      u
  ||  |||||||||| || ||||||       
  CC  UAGGGACCGU AC ACUAaa      a
CA  AU          U  -      auuaga 

Annotation confidence High

Genome context

Unknown

Mature bta-miR-23b-5p

• Accession: MIMAT0012538
• Description: Bos taurus bta-miR-23b-5p mature miRNA
• Sequence: 1 - GGGUUCCUGGCAUGCUGAUUU - 21
• Evidence: experimental ; Illumina [3]

Mature bta-miR-23b-3p

• Accession: MIMAT0003852
• Description: Bos taurus bta-miR-23b-3p mature miRNA
• Sequence: 38 - AUCACAUUGCCAGGGAUUACCAC - 60
• Evidence: experimental ; cloned [1-2], Illumina [3]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988


3. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349