Accession
MI0005705
Description
Chlamydomonas reinhardtii
cre-MIR912 precursor miRNA
Sequence
767091
reads,
24246.0
reads per million, 51 experiments
gccuaugccucugccggccaucaauggcgcucacgacaagggugccaucgucaccggucuaaucuaaugccaggcaaccagggaagacacaggauccauuuucuagugccuggcugggaucaaugcaagAUGAUAGUUGGAUCCUGGACGccgaaggccaucaugcggugucaaccgcaugacggccguuggcgUCCAGGAUCUAGCUGUCGUCUuggauugaucccagccaggcgcuuggagauggacccacggucuucccucccuuguugccuggguuccgagcagaccggcgacgauggcaccaccgucguuggcuccagggcauugacggcccggcggagaaccaggc
((((....(((((((((((.((((((.((((.(((((...((((((((((((.(((((((..((.....(((((((((.(((((((((...((.(((((((((.((((((((((((((((((((.(((((((((((((((((((((((((((((.((((.(((((((((....))))))))).)))).))))))))))))))))))))))))))))).)))))))))))))))))))).))))))))).))...))))))))).....))))))))).....))..))))))).))))))))))))...))))).))).....).)))))).)).)))))))))....))))
((((....(((((((((((.((((((.((((.(((((...((((((((((((.(((((((..((.....(((((((((.(((((((((...((.(((((((((.((((((((((((((((((((.(((((((((((((((((((((((((((((.((((.(((((((((....))))))))).)))).))))))))))))))))))))))))))))).)))))))))))))))))))).))))))))).))...))))))))).....))))))))).....))..))))))).))))))))))))...))))).))).....).)))))).)).)))))))))....))))
Structure
augc - a g ----- c aag a aa uaaug ----c aca a u g a a g
gccu cucugccgg cc ucaaug c gcu acgac ggugccaucguc ccggucu uc ccaggcaac agggaagac gg uccauuuuc agugccuggcugggaucaau caagAUGAUAGUUGGAUCCUGGACGccga ggcc ucaugcggu u
|||| ||||||||| || |||||| | ||| ||||| |||||||||||| ||||||| || ||||||||| ||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||
cgga gaggcggcc gg aguuac g cgg ugcug ccacgguagcag ggccaga ag gguccguug ucccuucug cc agguagagg ucgcggaccgacccuaguua guUCUGCUGUCGAUCUAGGACCUgcgguu ccgg aguacgcca c
ccaa c c g gaccu u cca c cg ccuug uuccc gca c u g g c a
Annotation confidence
High
Do you think this miRNA is real?
Comments
Molner et al. confirm that the mature miRNA product identified by Zhao et al. and shown here is the predominant one [2]. They also identify 3 further minor products from the same hairpin, not shown here.
Genome context
ref|NC_057012.1|: 6365792-6366143 [-]
Database links
Mature cre-miR912-5p
| Accession | MIMAT0060762 |
| Description | Chlamydomonas reinhardtii cre-miR912-5p mature miRNA |
| Sequence | 130 - AUGAUAGUUGGAUCCUGGACG - 150 |
| Evidence |
experimental
unknown |
Mature cre-miR912-3p
| Accession | MIMAT0004395 |
| Description | Chlamydomonas reinhardtii cre-miR912-3p mature miRNA |
| Sequence | 195 - UCCAGGAUCUAGCUGUCGUCU - 215 |
| Evidence |
experimental
cloned [1-2] |
References
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