Accession
MI0006205
Description
Chlamydomonas reinhardtii
cre-MIR1144a precursor miRNA
Sequence
cggcggcguuggacugcuggggugcagcaggcuUGGAACCGGGCACGCAGGAGguggguuuuguggcggcaggnagCAGGCAGCGCGGGGCUGCUGGuggugguggaggaggaugaaguucgccauucaaacaacccuuucugcaccgguccugugcugcccguugccugcaggagcaaaacacacccacuccguguccggcuccaagauugcugaaccccugucgcuggcugcugccg
((((((((((((.(.((.(((((.(((((..((((((.(((((((((.((..((((.(((((((..(.(((((.(((.((((((((((((((...((((.(((.(((((.(..((((........))))..)...)))))))))))))))))))))))))).))).))))).)..))))))).))))..)).))))))))).))))))..))))).))))).)).)))))).)))))))
((((((((((((.(.((.(((((.(((((..((((((.(((((((((.((..((((.(((((((..(.(((((.(((.((((((((((((((...((((.(((.(((((.(..((((........))))..)...)))))))))))))))))))))))))).))).))))).)..))))))).))))..)).))))))))).))))))..))))).))))).)).)))))).)))))))
Structure
- a u u g gg A C GA g gg g n A GCU g u --a ga guu
cggcggc guugg c gc ggggu cagca cuUGGA CCGGGCACG AG Ggug guuuugu c gcagg agC GGCAGCGCGGGGCU GGug ugg ggagg g ugaa c
||||||| ||||| | || ||||| ||||| |||||| ||||||||| || |||| ||||||| | ||||| ||| |||||||||||||| |||| ||| ||||| | ||||
gccgucg cgguc g ug cccca gucgu gaaccu ggccugugc uc ccac caaaacg g cgucc uug ccgucguguccugg ccac guc uuucc c acuu g
u - c u a ua c c ac a ag a g c --- - - caa aa acc
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
The predominant product from this hairpin precursor is named cre-miR1144a.1 here [1].
Genome context
Unknown
Database links
Mature cre-miR1144a.2
| Accession | MIMAT0005379 |
| Description | Chlamydomonas reinhardtii cre-miR1144a.2 mature miRNA |
| Sequence | 34 - UGGAACCGGGCACGCAGGAG - 53 |
| Evidence |
experimental
cloned [1] |
Mature cre-miR1144a.1
| Accession | MIMAT0005380 |
| Description | Chlamydomonas reinhardtii cre-miR1144a.1 mature miRNA |
| Sequence | 77 - CAGGCAGCGCGGGGCUGCUGG - 97 |
| Evidence |
experimental
cloned [1] |
References
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