Accession
MI0006209
Description
Chlamydomonas reinhardtii
cre-MIR1148 precursor miRNA
Sequence
6103
reads,
218.0
reads per million, 37 experiments
caGGGACUGUUUACCAACGUGCAgggggacaugguggagauccuccuguccggcuaccuggagcgcaagcugggcgagagguuuuagccagacaggaggaucuccncuaagucccccUGCACGUUGGUAAACAGUCCCug
((((((((((((((((((((((((((((((.(((.(((((((((((((((.((((((((...((.((...)).))...))))...)))).))))))))))))))).))).))))))))))))))))))))))))))))))
((((((((((((((((((((((((((((((.(((.(((((((((((((((.((((((((...((.((...)).))...))))...)))).))))))))))))))).))).))))))))))))))))))))))))))))))
Structure
a u c --- gga g a
caGGGACUGUUUACCAACGUGCAgggggac ugg ggagauccuccuguc ggcu accu gc ca
|||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||| || || g
guCCCUGACAAAUGGUUGCACGUcccccug auc ccucuaggaggacag ccga ugga cg gu
a n a uuu gag g c
Annotation confidence
High
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Genome context
ref|NC_057014.1|: 1442256-1442389 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cre-MIR1148
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cre-miR1148-5p
| Accession | MIMAT0005386 |
| Description | Chlamydomonas reinhardtii cre-miR1148-5p mature miRNA |
| Sequence | 3 - GGGACUGUUUACCAACGUGCA - 23 |
| Evidence |
experimental
cloned [1] |
Mature cre-miR1148-3p
| Accession | MIMAT0005387 |
| Description | Chlamydomonas reinhardtii cre-miR1148-3p mature miRNA |
| Sequence | 118 - UGCACGUUGGUAAACAGUCCC - 138 |
| Evidence |
experimental
cloned [1] |
References
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