Stem-loop cre-MIR1149

Accession

MI0006210

Description

Chlamydomonas reinhardtii cre-MIR1149 precursor miRNA

Sequence

cgaccgccucgggcccgcuaugUCGGACAACACCGACCCCCAGCccgccaacaaggagauggcguuggcgggcuggggucggUGUUGUCUGACAUGGAGGGUCccaggcagucg
((((.((((.((((((.(((((((((((((((((((((((.(((((((((((...........)))))))))))))))))))))))))))))))))).)))))).)))).))))

Structure

    c    c      g                       C           aagg 
cgac gccu gggccc cuaugUCGGACAACACCGACCCC AGCccgccaac    a
|||| |||| |||||| ||||||||||||||||||||||| |||||||||||    g
gcug cgga cCUGGG GGUACAGUCUGUUGUggcugggg ucgggcgguug    a
    a    c      A                       -           cggu 

Annotation confidence Not enough data

Genome context

scaffold_1: 5256729-5256842 [+]

Mature cre-miR1149.1

• Accession: MIMAT0005388
• Description: Chlamydomonas reinhardtii cre-miR1149.1 mature miRNA
• Sequence: 23 - UCGGACAACACCGACCCCCAGC - 44
• Evidence: experimental ; cloned [1]

Mature cre-miR1149.2

• Accession: MIMAT0005389
• Description: Chlamydomonas reinhardtii cre-miR1149.2 mature miRNA
• Sequence: 83 - UGUUGUCUGACAUGGAGGGUC - 103
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17538623
   miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
   "Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC"
   "Nature (2007) 447:1126-1129