Stem-loop cre-MIR1164

Accession

MI0006225

Description

Chlamydomonas reinhardtii cre-MIR1164 precursor miRNA

Sequence

ggugcucuucUGGUGCAACAGGCCAGUGGUUugagugguggucgacggcaauugcuucagucuuacuugcuuggcuuacguacguacgccucaagcaaguaagacugaagcaauugcugccgaccaccgaucaaaccacuggccuguugcaccagcagagcacu
((((((((.(((((((((((((((((((((((((.(((((((((.((((((((((((((((((((((((((((((.(((....))).)))..))))))))))))))))))))))))))).))))))))).))))))))))))))))))))))))).))))))))

Structure

        u                         g         a                           --   u   g 
ggugcucu cUGGUGCAACAGGCCAGUGGUUuga ugguggucg cggcaauugcuucagucuuacuugcuu  ggc uac u
|||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||  ||| |||  
ucacgaga gaccacguuguccggucaccaaacu gccaccagc gucguuaacgaagucagaaugaacgaa  ccg aug a
        c                         a         c                           cu   c   c 

Annotation confidence Not enough data

Genome context

scaffold_32: 259603-259766 [+]

Mature cre-miR1164

• Accession: MIMAT0005419
• Description: Chlamydomonas reinhardtii cre-miR1164 mature miRNA
• Sequence: 11 - UGGUGCAACAGGCCAGUGGUU - 31
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17538623
   miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
   "Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC"
   "Nature (2007) 447:1126-1129