Stem-loop cre-MIR1165

Accession

MI0006226

Description

Chlamydomonas reinhardtii cre-MIR1165 precursor miRNA

Sequence

gcacuaUACCGUACAAGCGGUCCGUCCugcgccccauccugcguuugaaaacgcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaggACGGACCGCUUGUACGGAUAUGgcgc
((.((((((((((((((((((((((((((.(......).((((((....))))))..................................................))))))))))))))))))))).))))).))

Structure

  a     -                     ----------------------------------------cgccccaucc      u 
gc cuaUA CCGUACAAGCGGUCCGUCCug                                                  ugcguu g
|| ||||| |||||||||||||||||||||                                                  ||||||  
cg gGUAU GGCAUGUUCGCCAGGCAggac                                                  acgcaa a
  c     A                     nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn      a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cre-miR1165-5p

• Accession: MIMAT0005420
• Description: Chlamydomonas reinhardtii cre-miR1165-5p mature miRNA
• Sequence: 7 - UACCGUACAAGCGGUCCGUCC - 27
• Evidence: experimental ; cloned [1]

Mature cre-miR1165-3p

• Accession: MIMAT0005421
• Description: Chlamydomonas reinhardtii cre-miR1165-3p mature miRNA
• Sequence: 110 - ACGGACCGCUUGUACGGAUAUG - 131
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17538623
   miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
   "Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC"
   "Nature (2007) 447:1126-1129