Stem-loop cre-MIR1169

Accession

MI0006229

Description

Chlamydomonas reinhardtii cre-MIR1169 precursor miRNA

Sequence

152945 reads, 10512.0 reads per million, 51 experiments

uacggUAUCCAGCAAGCAACAUCCAcauaagccgggguugguagcaacacaucuaccaaccccggcuuaugUGGAUGUUGCUUGCUGGAUACcgug
((((((((((((((((((((((((((((((((((((((((((((........))))))))))))))))))))))))))))))))))))))))))))

Structure

                                            caa 
uacggUAUCCAGCAAGCAACAUCCAcauaagccgggguugguag   c
||||||||||||||||||||||||||||||||||||||||||||    
gugcCAUAGGUCGUUCGUUGUAGGUguauucggccccaaccauc   a
                                            uac 

Annotation confidence Medium

Genome context

ref|NC_057019.1|: 185085-185180 [-]

Mature cre-miR1169-5p

• Accession: MIMAT0005426
• Description: Chlamydomonas reinhardtii cre-miR1169-5p mature miRNA
• Sequence: 6 - UAUCCAGCAAGCAACAUCCA - 25
• Evidence: experimental ; cloned [1]

Mature cre-miR1169-3p

• Accession: MIMAT0005427
• Description: Chlamydomonas reinhardtii cre-miR1169-3p mature miRNA
• Sequence: 72 - UGGAUGUUGCUUGCUGGAUAC - 92
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17538623
   miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
   "Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC"
   "Nature (2007) 447:1126-1129