miRBase entry: cre-MIR1167

Stem-loop cre-MIR1167


Accession
MI0006234
Description
Chlamydomonas reinhardtii cre-MIR1167 precursor miRNA


Sequence

9027 reads, 679.0 reads per million, 51 experiments
gagcaucaugcaucguuacaccccccaccgugcaccuucacgcucaugcgcagcacugugcaugcuuGGGGUGUGAUGAUUUGAAACuu
(((..(((...(((((((((((((....(((((((.....(((....))).......)))))))...))))))))))))).)))..)))

Structure
   ca   ugc             ccac       --cuuca   u 
gag  uca   aucguuacacccc    cgugcac       cgc c
|||  |||   |||||||||||||    |||||||       |||  
uuC  AGU   UAGUAGUGUGGGG    guacgug       gcg a
   AA   --U             -uuc       ucacgac   u 


Annotation confidence Not enough data
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Genome context
ref|NC_057010.1|: 2235917-2236005 [+]

Database links

Mature cre-miR1167-3p

Accession MIMAT0005434
Description Chlamydomonas reinhardtii cre-miR1167-3p mature miRNA
Sequence 68 - GGGGUGUGAUGAUUUGAAAC - 87
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17538623
    miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
    "Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC"
    "Nature (2007) 447:1126-1129