Stem-loop spu-mir-153

Accession

MI0010205

Description

Strongylocentrotus purpuratus spu-mir-153 precursor miRNA mir-153

Gene
family

RF00650; mir-153

Sequence

cccgccagcccgaUCAUUUUUGUGUUUAUGCAACUuuuguauuuucaccgaucagaguagUUGCAUAGUCACAAAAGUGAUUgggaggguugggcucuaac
((((((..((((((((((((((((.((((((((((((((.(((......)))))))..)))))))))).))))))))))))))))..)).)))).......

Structure

-------    -  ag                U          --    u   uu 
       cccg cc  cccgaUCAUUUUUGUG UUAUGCAACU  uuug auu  c
       |||| ||  |||||||||||||||| ||||||||||  |||| |||   
       gggu gg  gggUUAGUGAAAACAC GAUACGUUga  agac uag  a
caaucuc    u  ga                U          ug    -   cc 

Annotation confidence Low

Genome context

KN916494.1: 661159-661259 [+]

Mature spu-miR-153-3p

• Accession: MIMAT0009669
• Description: Strongylocentrotus purpuratus spu-miR-153-3p mature miRNA
• Sequence: 61 - UUGCAUAGUCACAAAAGUGAUU - 82
• Evidence: experimental ; 454 [1]

Mature spu-miR-153-5p

• Accession: MIMAT0019162
• Description: Strongylocentrotus purpuratus spu-miR-153-5p mature miRNA
• Sequence: 14 - UCAUUUUUGUGUUUAUGCAACU - 35
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27