Stem-loop spu-mir-2003

Accession

MI0010273

Description

Strongylocentrotus purpuratus spu-mir-2003 precursor miRNA mir-2003

Gene
family

RF04259; mir-2003

Sequence

gcugguuggccuaAACCCGUAAGGUCUUAACUUGUGcuggaguuacaaguacaCAGGUUAUGCCCUUUGGGUAGUAggccggacagaaua
.(((..(((((((.(((((.((((.(.((((((((((((......).))..))))))))).).)))))))))..)))))))..)))....

Structure

---g   gu       -A     U    U U         --  - ga 
    cug  uggccua  ACCCG AAGG C UAACUUGUG  cu g  g
    |||  |||||||  ||||| |||| | |||||||||  || |   
    gac  gccggAU  UGGGU UUCC G AUUGGACac  ga c  u
auaa   ag       GA     -    C U         au  a au 

Annotation confidence Low

Genome context

KN914398.1: 1117967-1118056 [-]

Mature spu-miR-2003-5p

• Accession: MIMAT0009744
• Description: Strongylocentrotus purpuratus spu-miR-2003-5p mature miRNA
• Sequence: 14 - AACCCGUAAGGUCUUAACUUGUG - 36
• Evidence: experimental ; 454 [1]

Mature spu-miR-2003-3p

• Accession: MIMAT0019166
• Description: Strongylocentrotus purpuratus spu-miR-2003-3p mature miRNA
• Sequence: 54 - CAGGUUAUGCCCUUUGGGUAGUA - 76
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27