Stem-loop dps-mir-989

Accession

MI0011591

Description

Drosophila pseudoobscura dps-mir-989 precursor miRNA

Sequence

acguugcgggaaugggccacuaccucgcagucacgugauaucggaaugcaaugaucuacguuaaauuguguuucuuuuugaauaguucaUGUGAUGUGACGUAGUGGAACAuuccuggcg
.(((..((((((((..(((((((.(((((.((((((((....((((((((((............))))))))))............))))))))))))).)))))))..)))))))))))

Structure

a   ug        gg       c     g        --------uauc          gaucu 
 cgu  cgggaaug  ccacuac ucgca ucacguga            ggaaugcaau     a
 |||  ||||||||  ||||||| ||||| ||||||||            ||||||||||      
 gcg  guccuuAC  GGUGAUG AGUGU AGUGUacu            cuuuguguua     c
-   --        AA       C     -        ugauaaguuuuu          aauug 

Annotation confidence Not enough data

Genome context

3: 2729300-2729419 [-]

Mature dps-miR-989

• Accession: MIMAT0012218
• Description: Drosophila pseudoobscura dps-miR-989 mature miRNA
• Sequence: 90 - UGUGAUGUGACGUAGUGGAACA - 111
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9