Stem-loop dps-mir-970

Accession

MI0011593

Description

Drosophila pseudoobscura dps-mir-970 precursor miRNA

Sequence

ggcaucuguugcAGCUAGCGGGUGUUUUAUCUGGUAgcuguacccuuuugaaucuaUCAUAAGACACACGCGGCUAUgaccgaugccc
((((((.((((.((((.(((.((((((((..((((((...((......))...)))))))))))))).))))))).)))).)))))).

Structure

-      u    c    A   G        UC      cug  cc 
 ggcauc guug AGCU GCG GUGUUUUA  UGGUAg   ua  c
 |||||| |||| |||| ||| ||||||||  ||||||   ||   
 ccguag cagU UCGG CGC CACAGAAU  ACUauc   gu  u
c      c    A    -   A        --      uaa  uu 

Annotation confidence Not enough data

Genome context

XL_group1a: 3316436-3316523 [+]

Mature dps-miR-970-5p

• Accession: MIMAT0012221
• Description: Drosophila pseudoobscura dps-miR-970-5p mature miRNA
• Sequence: 13 - AGCUAGCGGGUGUUUUAUCUGGUA - 36
• Evidence: experimental ; Illumina [1]

Mature dps-miR-970-3p

• Accession: MIMAT0012222
• Description: Drosophila pseudoobscura dps-miR-970-3p mature miRNA
• Sequence: 57 - UCAUAAGACACACGCGGCUAU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9