Stem-loop dps-mir-958

Accession

MI0011598

Description

Drosophila pseudoobscura dps-mir-958 precursor miRNA

Sequence

cgaucgguguguauuuggcaAGUAGAAUAGCAGGCUUAUCACAuguuccauucaauccgcugUGAGAUUCUUCUAUUCUACUUUcgacaaacacccguug
((((.(((((....((((.(((((((((((.(((....(((((.((............)))))))....))))))))))))))))))...))))).))))

Structure

    c     guau    c           C   CUUA     u  uccau 
cgau ggugu    uugg aAGUAGAAUAG AGG    UCACA gu     u
|||| |||||    |||| ||||||||||| |||    ||||| ||      
guug ccaca    agcU UUCAUCUUAUC UUC    AGUgu cg     c
    c     -aac    -           -   UUAG     -  ccuaa 

Annotation confidence Not enough data

Genome context

XR_group8: 344180-344279 [-]

Mature dps-miR-958-5p

• Accession: MIMAT0012231
• Description: Drosophila pseudoobscura dps-miR-958-5p mature miRNA
• Sequence: 21 - AGUAGAAUAGCAGGCUUAUCACA - 43
• Evidence: experimental ; Illumina [1]

Mature dps-miR-958-3p

• Accession: MIMAT0012232
• Description: Drosophila pseudoobscura dps-miR-958-3p mature miRNA
• Sequence: 63 - UGAGAUUCUUCUAUUCUACUUU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9