Stem-loop dps-mir-987

Accession

MI0011600

Description

Drosophila pseudoobscura dps-mir-987 precursor miRNA

Sequence

150374 reads, 1210.0 reads per million, 22 experiments

cagaaauaauguuggacugugcuUAAAGUAAAUAGUCUGGAUUGAUGaaaguuauauucaagaauucAUCAACAGGCAUUUACUUCAACugcaguuuaaacgauaugcaacug
(((..(((.((((((((((((.((.((((((((.(((((..((((((((...............))))))))))))))))))))).)).)))))))).)))).)))....)))

Structure

   --aa   a    -        c  A        A     GA        aguuau 
cag    aua uguu ggacugug uU AAGUAAAU GUCUG  UUGAUGaa      a
|||    ||| |||| |||||||| || |||||||| |||||  ||||||||      u
guc    uau gcaa uuugacgu AA UUCAUUUA CGGAC  AACUAcuu      u
   aacg   a    a        C  C        -     --        aagaac 

Annotation confidence High

Genome context

ref|NC_046680.1|: 13001963-13002075 [-]

Mature dps-miR-987-5p

• Accession: MIMAT0012235
• Description: Drosophila pseudoobscura dps-miR-987-5p mature miRNA
• Sequence: 24 - UAAAGUAAAUAGUCUGGAUUGAUG - 47
• Evidence: experimental ; Illumina [1]

Mature dps-miR-987-3p

• Accession: MIMAT0012236
• Description: Drosophila pseudoobscura dps-miR-987-3p mature miRNA
• Sequence: 68 - AUCAACAGGCAUUUACUUCAAC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9