Stem-loop dps-mir-994

Accession

MI0011602

Description

Drosophila pseudoobscura dps-mir-994 precursor miRNA

Sequence

1508 reads, 519.0 reads per million, 21 experiments

cugaauuuauaucgaguuauCUAAGGAAAUAGUAGCCGUGAUUuaacauacaaauccuuuacauauCACAGUUGCUGUUUCUUUUAGAUagcucuuuuguaagcagc
(((..((((((..(((((((((((((((((((((((.(((((......................))))).))))))))))).))))))))))))...))))))))).

Structure

-   aa      -uc            -           C     Uuaacauaca 
 cug  uuuaua   gaguuauCUAAG GAAAUAGUAGC GUGAU          a
 |||  ||||||   |||||||||||| ||||||||||| |||||           
 gac  gaaugu   cucgaUAGAUUU CUUUGUCGUUG CACua          a
c   --      uuu            U           A     uacauuuccu 

Annotation confidence High

Genome context

ref|NC_046679.1|: 7628178-7628284 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dps-mir-994

Mature dps-miR-994-5p

• Accession: MIMAT0012239
• Description: Drosophila pseudoobscura dps-miR-994-5p mature miRNA
• Sequence: 21 - CUAAGGAAAUAGUAGCCGUGAUU - 43
• Evidence: experimental ; Illumina [1]

Mature dps-miR-994-3p

• Accession: MIMAT0012240
• Description: Drosophila pseudoobscura dps-miR-994-3p mature miRNA
• Sequence: 67 - CACAGUUGCUGUUUCUUUUAGAU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9