Stem-loop dps-mir-993

Accession

MI0011614

Description

Drosophila pseudoobscura dps-mir-993 precursor miRNA

Sequence

cucccgugacCUACCCUGUAGUUCCGGGCUUUUGuuuauauugcgcccgauguauuuucgaguguuugugucgauuaucaGAAGCUCGUCUCUACAGGUAUCUcacaggguaga
(((((((((..((((.(((((...((((((((((((.((((.((((.(((.......))).))))..)))).))....))))))))))...)))))))))..)))).))).)).

Structure

-  -   -    cC    C     UUC          ----  u    -u    c   ug 
 cu ccc guga  UACC UGUAG   CGGGCUUUUG    uu auau  gcgc cga  u
 || ||| ||||  |||| |||||   ||||||||||    || ||||  |||| |||  a
 ga ggg cacU  AUGG ACAUC   GCUCGAAGac    ag ugug  ugug gcu  u
a  u   a    CU    -     UCU          uauu  c    uu    a   uu 

Annotation confidence Not enough data

Genome context

2: 19773790-19773903 [-]

Mature dps-miR-993-5p

• Accession: MIMAT0012263
• Description: Drosophila pseudoobscura dps-miR-993-5p mature miRNA
• Sequence: 11 - CUACCCUGUAGUUCCGGGCUUUUG - 34
• Evidence: experimental ; Illumina [1]

Mature dps-miR-993-3p

• Accession: MIMAT0012264
• Description: Drosophila pseudoobscura dps-miR-993-3p mature miRNA
• Sequence: 81 - GAAGCUCGUCUCUACAGGUAUCU - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9