Stem-loop dps-mir-3983

Accession

MI0011624

Description

Drosophila pseudoobscura dps-mir-3983 precursor miRNA

Sequence

gucccgcaccauAGAUGCCACUAAGAGAUCACggguuguauugaaaaaccccgugaauucuuccagugccauuaacugugccgggaug
(((((((((....((((.(((((((((.(((((((((.........)).))))))).)))))..)))).))))....))).)))))).

Structure

-      -   cauA    C    --     A       -  gua 
 gucccg cac    GAUG CACU  AAGAG UCACggg uu   u
 |||||| |||    |||| ||||  ||||| ||||||| ||   u
 uagggc gug    uuac guga  uucuu agugccc aa   g
g      c   ucaa    c    cc     a       c  aaa 

Annotation confidence Not enough data

Genome context

4_group3: 7322805-7322892 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dps-mir-3983

Mature dps-miR-3983

• Accession: MIMAT0012282
• Description: Drosophila pseudoobscura dps-miR-3983 mature miRNA
• Sequence: 13 - AGAUGCCACUAAGAGAUCAC - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9