Stem-loop dps-mir-210b

Accession

MI0011625

Description

Drosophila pseudoobscura dps-mir-210b precursor miRNA

Sequence

ugaugcuaauauggccucuuacaauagccgcugucacacgcacaagagucuuaaaucuaaucUUGUGCAGUGGCCAGCAGCUGCaauaaguaccgaucgagcuaaauca
(((((((....(((...((((...((((.((((((((..((((((((.............)))))))).)))).)))).))))...))))..)))....)))...))))

Structure

    ---   aaua   ccu    caa    c    -    ac        gucuu 
ugau   gcu    ugg   cuua   uagc gcug ucac  gcacaaga     a
||||   |||    |||   ||||   |||| |||| ||||  ||||||||     a
acua   cga    gcc   gaau   GUCG CGAC GGUG  CGUGUUcu     a
    aau   gcua   -au    aaC    A    C    -A        aaucu 

Annotation confidence Not enough data

Genome context

XL_group3a: 1970510-1970618 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dps-mir-210b

Mature dps-miR-210b

• Accession: MIMAT0012283
• Description: Drosophila pseudoobscura dps-miR-210b mature miRNA
• Sequence: 63 - UUGUGCAGUGGCCAGCAGCUGC - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9