Stem-loop dps-mir-iab-8

Accession

MI0011626

Description

Drosophila pseudoobscura dps-mir-iab-8 precursor miRNA

Sequence

ugcugguguuuccucgugUUACGUAUACUGAAGGUAUACCggauaggauacacucAGGAUACAUUCAGUAUACGUAUAcgaagucgcacaggu
.(((.((((..(.((((((.((((((((((((.((((.((.((..(....)..)).)))))).)))))))))))))))))).)..)))).)))

Structure

u   g    uu c      U            G    A  g  ua g 
 gcu gugu  c ucgugU ACGUAUACUGAA GUAU CC ga  g a
 ||| ||||  | |||||| |||||||||||| |||| || ||  |  
 ugg cacg  g agcAUA UGCAUAUGACUU CAUA GG cu  c u
-   a    cu a      -            A    -  A  ca a 

Annotation confidence Not enough data

Genome context

2: 17671755-17671847 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dps-mir-iab-8

Mature dps-miR-iab-8-5p

• Accession: MIMAT0012284
• Description: Drosophila pseudoobscura dps-miR-iab-8-5p mature miRNA
• Sequence: 19 - UUACGUAUACUGAAGGUAUACC - 40
• Evidence: experimental ; Illumina [1]

Mature dps-miR-iab-8-3p

• Accession: MIMAT0012285
• Description: Drosophila pseudoobscura dps-miR-iab-8-3p mature miRNA
• Sequence: 56 - AGGAUACAUUCAGUAUACGUAUA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9