Stem-loop dps-mir-2502

Accession

MI0011627

Description

Drosophila pseudoobscura dps-mir-2502 precursor miRNA

Sequence

2999 reads, 24.0 reads per million, 20 experiments

gcugcaacaacggcaggcggcggcaacgGCGGCAGCGCCAGCAACAGCUagaguuauaggacagCUGCUGCCGAUGCUGCUGccgcugcugcugcccaaacggaauugcagu
(((((((...((...((((((((((.(((((((((((.(.(((.(((((...(((....)))))))).))).).))))))))))).))))))))))....))...)))))))

Structure

       caa  -gca          a           C A   A     aga   a 
gcugcaa   cg    ggcggcggca cgGCGGCAGCG C GCA CAGCU   guu u
|||||||   ||    |||||||||| ||||||||||| | ||| |||||   |||  
ugacguu   gc    ccgucgucgu gccGUCGUCGU G CGU GUCga   cag a
       aag  aaac          c           A C   C     ---   g 

Annotation confidence Medium

Genome context

ref|NC_046679.1|: 17001509-17001620 [-]

Mature dps-miR-2502-5p

• Accession: MIMAT0012286
• Description: Drosophila pseudoobscura dps-miR-2502-5p mature miRNA
• Sequence: 29 - GCGGCAGCGCCAGCAACAGCU - 49
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2502-3p

• Accession: MIMAT0053422
• Description: Drosophila pseudoobscura dps-miR-2502-3p mature miRNA
• Sequence: 65 - CUGCUGCCGAUGCUGCUG - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9