Stem-loop dps-mir-2504

Accession

MI0011629

Description

Drosophila pseudoobscura dps-mir-2504 precursor miRNA

Sequence

gucucggaucugGUAAGGAUUAAGAUUAAAUGUUgauucaaaucggugucccguuuaaccucuaguucuuguucuguaca
((..((((.....(((((((((((.(((((((..(((.(......).))).))))))).)).))))))))).)))).)).

Structure

-  cu    ucugG         -  A       UU   u aa 
 gu  cgga     UAAGGAUUA AG UUAAAUG  gau c  a
 ||  ||||     ||||||||| || |||||||  ||| |   
 ca  gucu     guucuugau uc aauuugc  cug g  u
a  -u    ----u         c  c       -c   u gc 

Annotation confidence Not enough data

Genome context

2: 23586051-23586130 [+]

Mature dps-miR-2504

• Accession: MIMAT0012288
• Description: Drosophila pseudoobscura dps-miR-2504 mature miRNA
• Sequence: 13 - GUAAGGAUUAAGAUUAAAUGUU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9