miRBase entry: dps-mir-2505

Stem-loop dps-mir-2505


Accession
MI0011630
Description
Drosophila pseudoobscura dps-mir-2505 precursor miRNA


Sequence

5275 reads, 38.0 reads per million, 20 experiments
ggaagaaucauuUCGUGCACAUACAAACAUACACuuuuguuguguguguguguguguguguguguacauauugauauauuucca
(((((.((((....(((((((((((.((((((((.............)))))))).)))))))))))....))))...))))).

Structure
-     --a    uuUC           A        uuuug 
 ggaag   auca    GUGCACAUACA ACAUACAC     u
 |||||   ||||    ||||||||||| ||||||||     u
 ccuuu   uagu    caugugugugu ugugugug     g
a     aua    uaua           g        ugugu 


Annotation confidence Not enough data
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Genome context
ref|NC_046679.1|: 26576982-26577059 [+]

Database links

Mature dps-miR-2505-5p

Accession MIMAT0012289
Description Drosophila pseudoobscura dps-miR-2505-5p mature miRNA
Sequence 13 - UCGUGCACAUACAAACAUACAC - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9