Stem-loop dps-mir-276c

Accession

MI0011634

Description

Drosophila pseudoobscura dps-mir-276c precursor miRNA

Sequence

15086 reads, 124.0 reads per million, 16 experiments

gagugauccagagcggauauaccaucagcccuguuucgagcuucauuuucguuaaauugacgggaaAAGGAACUUGAGAACAAGGUUGAuuggauuccuguuaugaaaucuacuca
(((((((.((.(((((..((.(((((((((.(((((((((.(((.(((((((((...)))))))))...))))))))).))).)))))).)))))..))))).))..))).)))).

Structure

-    -   -c  g     au  a   -      c   -      c   --a         a 
 gagu gau  ca agcgg  au cca ucagcc ugu uucgag uuc   uuuucguua  
 |||| |||  || |||||  || ||| |||||| ||| |||||| |||   ||||||||| a
 cuca cua  gu uuguc  ua ggu AGUUGG ACA GAGUUC AAG   aagggcagu  
a    u   aa  a     cu  -   u      A   A      -   GAA         u 

Annotation confidence Not enough data

Genome context

ref|NC_046681.1|: 6348996-6349111 [+]

Mature dps-miR-276c-3p

• Accession: MIMAT0012293
• Description: Drosophila pseudoobscura dps-miR-276c-3p mature miRNA
• Sequence: 67 - AAGGAACUUGAGAACAAGGUUGA - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9