Stem-loop dps-mir-2509

Accession

MI0011635

Description

Drosophila pseudoobscura dps-mir-2509 precursor miRNA

Sequence

ugaugcaaauggagcagucguguUUUAAGGUACAGACUUUGAGUCuauucuaggcaucaauuuucguaucuuuuaauucgucuggcgccaacagcaacag
((.(((...(((.((((.((.(((..(((((((.((..(((((((((...))))).))))..)).)))))))..))).)).)).)).)))...))).)).

Structure

-  a   aaa   a  -  u  u   UU       A  CU    -     u 
 ug ugc   ugg gc ag cg guU  AAGGUAC GA  UUGA GUCua  
 || |||   ||| || || || |||  ||||||| ||  |||| ||||| u
 ac acg   acc cg uc gc uaa  uucuaug uu  aacu cggau  
g  a   aca   g  g  u  u   uu       c  uu    a     c 

Annotation confidence Not enough data

Genome context

4_group4: 3182231-3182330 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from dps-mir-2509

Mature dps-miR-2509

• Accession: MIMAT0012294
• Description: Drosophila pseudoobscura dps-miR-2509 mature miRNA
• Sequence: 24 - UUUAAGGUACAGACUUUGAGUC - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9