miRBase entry: dps-mir-2513a

Stem-loop dps-mir-2513a

Accession

MI0011640

Description

Drosophila pseudoobscura dps-mir-2513a precursor miRNA

Sequence

guagaggaccaacgugcuaccaugUAAAGCAACUUCAGACCAUAGUaauaaggaauaauaugaaaaauugaaauauuaugguuugaagaugguuuacaugguaguacguugguccuuuac
((((((((((((((((((((((((((((.((.(((((((((((((((..........................))))))))))))))).)).))))))))))))))))))))))))))))

Structure

                            G  A               auaaggaauaau 
guagaggaccaacgugcuaccaugUAAA CA CUUCAGACCAUAGUa            a
|||||||||||||||||||||||||||| || |||||||||||||||             
cauuuccugguugcaugaugguacauuu gu gaaguuugguauuau            u
                            g  a               aaaguuaaaaag

Annotation confidence Not enough data

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Genome context

Unknown_group_64: 7644-7763 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dps-mir-2513a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dps-miR-2513a

Accession	MIMAT0012298
Description	Drosophila pseudoobscura dps-miR-2513a mature miRNA
Sequence	25 - UAAAGCAACUUCAGACCAUAGU - 46
Evidence	experimental Illumina [1]

References

PubMed ID: 20037610
Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
"Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
"Nat Genet (2010) 42:6-9