Stem-loop dps-mir-2515

Accession

MI0011642

Description

Drosophila pseudoobscura dps-mir-2515 precursor miRNA

Sequence

69 reads, 1.0 reads per million, 11 experiments

ccuaggauacgccUGAUGAGUGUUUUCCCAAUUUgacuguggugguuguggguagacccuacagccUCUAUAAUUGGCAGUGUGGGAGCCAacacaguuggcacacuuggg
((((((....(((.(((..(((((((((((..(((..(((((.(((((((((.....))))))))).))))).....)))..))))))..))))).))))))...))))))

Structure

      auac   U   GA     --      AU   ---ac     u         u 
ccuagg    gcc GAU  GUGUU  UUCCCA  UUg     ugugg gguuguggg a
||||||    ||| |||  |||||  ||||||  |||     ||||| ||||||||| g
ggguuc    cgg uug  cacaA  GAGGGU  GAC     AUAUC ccgacaucc a
      -aca   -   -a     CC      GU   GGUUA     U         c 

Annotation confidence Medium

Genome context

ref|NC_046683.1|: 25422373-25422483 [+]

Mature dps-miR-2515-5p

• Accession: MIMAT0012300
• Description: Drosophila pseudoobscura dps-miR-2515-5p mature miRNA
• Sequence: 14 - UGAUGAGUGUUUUCCCAAUUU - 34
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2515-3p

• Accession: MIMAT0053429
• Description: Drosophila pseudoobscura dps-miR-2515-3p mature miRNA
• Sequence: 67 - UCUAUAAUUGGCAGUGUGGGAGCCA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9