Stem-loop dps-mir-2521

Accession

MI0011654

Description

Drosophila pseudoobscura dps-mir-2521 precursor miRNA

Sequence

ggauugacggugggaggugauuaggccaaauuucauugauagauucgaaauccAAUAAUUUGGCCUAGCAUUCGAuaccgcaaucca
((((((.(((((...((((.((((((((((((..((((...((((...))))))))))))))))))))))))...))))))))))).

Structure

-      a     gga    a            uc    aua    c 
 ggauug cggug   ggug uuaggccaaauu  auug   gauu  
 |||||| |||||   |||| ||||||||||||  ||||   |||| g
 ccuaac gccau   UUAC GAUCCGGUUUAA  UAAc   cuaa  
a      -     AGC    -            --    ---    a 

Annotation confidence Not enough data

Genome context

XL_group1e: 8362756-8362842 [-]

Clustered miRNAs

10 other miRNAs are < 10 kb from dps-mir-2521

Mature dps-miR-2521

• Accession: MIMAT0012309
• Description: Drosophila pseudoobscura dps-miR-2521 mature miRNA
• Sequence: 54 - AAUAAUUUGGCCUAGCAUUCGA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9