miRBase entry: dps-mir-2522a

Stem-loop dps-mir-2522a

Accession

MI0011655

Description

Drosophila pseudoobscura dps-mir-2522a precursor miRNA

Sequence

gcuccauuuuguacgauugaaguacuagcggagaaugcguuguuauuggugucuguggaaauccaAAAGCAGCGAUGUUCUUCGGCAGuaccacaaucaauauuuagugagu
((((.(((..(((.(((((..(((((..((((((((((((((((.((((.............)))).))))))).)))))))))..)))))..)))))..)))..)))))))

Structure

    c   uu   -c     aa     ag         -       a    ugucu 
gcuc auu  gua  gauug  guacu  cggagaaug cguuguu uugg     g
|||| |||  |||  |||||  |||||  ||||||||| ||||||| ||||     u
ugag uga  uau  cuaac  cauGA  GCUUCUUGU GCGACGA Aacc     g
    -   uu   aa     ac     CG         A       A    uaaag

Annotation confidence Not enough data

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Genome context

XL_group1e: 8365900-8366011 [-]

Clustered miRNAs

12 other miRNAs are < 10 kb from dps-mir-2522a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dps-miR-2522a

Accession	MIMAT0012310
Description	Drosophila pseudoobscura dps-miR-2522a mature miRNA
Sequence	66 - AAAGCAGCGAUGUUCUUCGGCAG - 88
Evidence	experimental Illumina [1]

References

PubMed ID: 20037610
Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
"Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
"Nat Genet (2010) 42:6-9