Stem-loop dps-mir-2523

Accession

MI0011656

Description

Drosophila pseudoobscura dps-mir-2523 precursor miRNA

Sequence

ucaaaugagaaugaaaugagauacuuuagguuauauguuuuuaccuucgguuuuuugguaucugAAGUAACUACAUAUGAUCGAGAgugccucuguuucuuggccacauucgac
((.((((.....((((((((.((((((.((((((((((..((((.(((((...........)))))))))..)))))))))).)))))).))).))))).......)))).)).

Structure

-  a    --agaau     -   a      a          uu    c     uuuu 
 uc aaug       gaaau gag uacuuu gguuauaugu  uuac uucgg    u
 || ||||       ||||| ||| |||||| ||||||||||  |||| |||||    u
 ag uuac       cuuug cuc gugAGA CUAGUAUACA  AAUG AAguc    g
c  c    accgguu     u   c      G          UC    -     uaug 

Annotation confidence Not enough data

Genome context

XL_group1e: 8366995-8367108 [-]

Clustered miRNAs

14 other miRNAs are < 10 kb from dps-mir-2523

Mature dps-miR-2523

• Accession: MIMAT0012311
• Description: Drosophila pseudoobscura dps-miR-2523 mature miRNA
• Sequence: 65 - AAGUAACUACAUAUGAUCGAGA - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9