Stem-loop dps-mir-2527

Accession

MI0011661

Description

Drosophila pseudoobscura dps-mir-2527 precursor miRNA

Sequence

3714 reads, 36.0 reads per million, 15 experiments

ucguauucaaUGAUGGAUGUAGGUGUAGAGAgaaagggcgcaccagucaaaaaaagagauuggcuuucguugucugcuguaacuuuacucUCUGCCUCUAUUUUCAUGACUgacuaugag
(((((.(((.(.(((((.(((((.((((((((.((((..(((.(((.(((..((((.......))))..))).))).)))..)))).)))))))).))))).))))).).))).))))).

Structure

-     u   a G     U     U        a    gc   c   u   aa    ag 
 ucgua uca U AUGGA GUAGG GUAGAGAg aagg  gca cag caa  aaag  a
 ||||| ||| | ||||| ||||| |||||||| ||||  ||| ||| |||  ||||  u
 aguau agU A UACUU UAUCU CGUCUcuc uuuc  ugu guc guu  uuuc  u
g     c   C G     U     C        a    aa   c   u   gc    gg 

Annotation confidence High

Genome context

ref|NC_046683.1|: 7982105-7982224 [-]

Mature dps-miR-2527-5p

• Accession: MIMAT0012317
• Description: Drosophila pseudoobscura dps-miR-2527-5p mature miRNA
• Sequence: 11 - UGAUGGAUGUAGGUGUAGAGA - 31
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2527-3p

• Accession: MIMAT0053440
• Description: Drosophila pseudoobscura dps-miR-2527-3p mature miRNA
• Sequence: 91 - UCUGCCUCUAUUUUCAUGACU - 111
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9