Stem-loop dps-mir-2529

Accession

MI0011663

Description

Drosophila pseudoobscura dps-mir-2529 precursor miRNA

Sequence

946 reads, 7.0 reads per million, 18 experiments

gccgguuuugggcaaAAUUAUCGUGUCACUCAUUAUUcaacgcauuuuuacuucggggaaggcaaaaugcguagaaAAGUGGGUGACAGGAUAAUGUUggaucgaagcgggca
(((.(((((((.(((.((((((.(((((((((((.(((.(((((((((..((((...))))..))))))))).))).))))))))))).)))))).)))..))))))).))).

Structure

-   g       -g   A      G           A   a         ua    g 
 gcc guuuugg  caa AUUAUC UGUCACUCAUU UUc acgcauuuu  cuuc  
 ||| |||||||  ||| |||||| ||||||||||| ||| |||||||||  |||| g
 cgg cgaagcu  gUU UAAUAG ACAGUGGGUGA aag ugcguaaaa  gaag  
a   g       ag   G      G           A   a         cg    g 

Annotation confidence High

Genome context

ref|NC_046680.1|: 14677058-14677170 [+]

Mature dps-miR-2529-5p

• Accession: MIMAT0012318
• Description: Drosophila pseudoobscura dps-miR-2529-5p mature miRNA
• Sequence: 16 - AAUUAUCGUGUCACUCAUUAUU - 37
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2529-3p

• Accession: MIMAT0053443
• Description: Drosophila pseudoobscura dps-miR-2529-3p mature miRNA
• Sequence: 77 - AAGUGGGUGACAGGAUAAUGUU - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9