Stem-loop dps-mir-2530

Accession

MI0011664

Description

Drosophila pseudoobscura dps-mir-2530 precursor miRNA

Sequence

gacuaagcucauaaUAUUUCUGGAAGUUACAGUGGGCauauccaagccgcuaaauaugugagcuguuaacgccuuaaagccuuuugagucaagu
.(((..(((((.....(((..((..((((((((..((((((............))))))..)))).)))).))..)))......)))))..)))

Structure

g   aa     -uaaUA   CU  AA    -    GG      ccaag 
 acu  gcuca      UUU  GG  GUUA CAGU  GCauau     c
 |||  |||||      |||  ||  |||| ||||  ||||||      
 uga  ugagu      aaa  cc  caau gucg  uguaua     c
-   ac     uuuccg   uu  -g    u    ag      aaucg 

Annotation confidence Not enough data

Genome context

3: 11520725-11520818 [+]

Mature dps-miR-2530

• Accession: MIMAT0012319
• Description: Drosophila pseudoobscura dps-miR-2530 mature miRNA
• Sequence: 15 - UAUUUCUGGAAGUUACAGUGGGC - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9