Accession
MI0011672
Description
Drosophila pseudoobscura
dps-mir-2538 precursor miRNA
Sequence
1994
reads,
20.0
reads per million, 20 experiments
gaacacuguuuuaugcgguugaaguagUAGGUGGAAGAACUAAAAUAUUuguauauuuucaauugaaUAAAUUAGAUUUUCUGCCugcaacuucgauucgcaacgaccccuguuua
(((((..(((...((((((((((((.((((((((((((.((((..((((((............))))))..)))).)))))))))))).))))))).)))))..)))...))))).
(((((..(((...((((((((((((.((((((((((((.((((..((((((............))))))..)))).)))))))))))).))))))).)))))..)))...))))).
Structure
- -cu uua - a A AA uauau gaaca guu ugcgg uugaagu gUAGGUGGAAGA CUAA UAUUug u ||||| ||| ||||| ||||||| |||||||||||| |||| |||||| uuugu cag acgcu agcuuca cguCCGUCUUUU GAUU AUaagu u a ccc -ca u a A AA uaacu
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
ref|NC_046683.1|: 9710478-9710593 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from dps-mir-2538
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dps-miR-2538-5p
| Accession | MIMAT0012330 |
| Description | Drosophila pseudoobscura dps-miR-2538-5p mature miRNA |
| Sequence | 28 - UAGGUGGAAGAACUAAAAUAUU - 49 |
| Evidence |
experimental
Illumina [1] |
Mature dps-miR-2538-3p
| Accession | MIMAT0012331 |
| Description | Drosophila pseudoobscura dps-miR-2538-3p mature miRNA |
| Sequence | 68 - UAAAUUAGAUUUUCUGCC - 85 |
| Evidence |
experimental
Illumina [1] |
References
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