Accession
MI0011683
Description
Drosophila pseudoobscura
dps-mir-2542-3 precursor miRNA
Sequence
23016
reads,
157.0
reads per million, 20 experiments
gggcuuauauuugUAUUUUUGCUCGGACAUUUAUGuacaauuugaacgucaUAGAUGGUUGCAGCAUAAAUAGAauuauuagccc
(((((.(((.((.(((((.((((((..((((((((.((.........))))))))))..)).)))).))))).)).))).)))))
(((((.(((.((.(((((.((((((..((((((((.((.........))))))))))..)).)))).))))).)).))).)))))
Structure
u u g U - GA u aau
gggcu aua uu UAUUU UGCU CG CAUUUAUG ac u
||||| ||| || ||||| |||| || |||||||| || u
cccga uau aA AUAAA ACGA GU GUAGAUac ug g
u u G U C UG - caa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_046683.1|: 9691180-9691264 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from dps-mir-2542-3
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dps-miR-2542-5p
| Accession | MIMAT0012340 |
| Description | Drosophila pseudoobscura dps-miR-2542-5p mature miRNA |
| Sequence | 14 - UAUUUUUGCUCGGACAUUUAUG - 35 |
| Evidence |
experimental
Illumina [1] |
Mature dps-miR-2542-3p
| Accession | MIMAT0012341 |
| Description | Drosophila pseudoobscura dps-miR-2542-3p mature miRNA |
| Sequence | 52 - UAGAUGGUUGCAGCAUAAAUAGA - 74 |
| Evidence |
experimental
Illumina [1] |
References
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