Stem-loop dps-mir-2548

Accession

MI0011690

Description

Drosophila pseudoobscura dps-mir-2548 precursor miRNA

Sequence

gaaaguugcaguccugccagcUGGUGGAUUAACUGUUGCCAaaagcucaacuuuaaaaagcUUUGGUGUCAGCUUCCAGCAGCuggcggggaagcgac
....(((((..((((((((((((.((((....(((..((((((.(((...........)))))))))..)))..)))).))))))))))))..)))))

Structure

gaaa     ag            G    UUAA   UU      a   caac 
    guugc  uccugccagcUG UGGA    CUG  GCCAaa gcu    u
    |||||  |||||||||||| ||||    |||  |||||| |||    u
    cagcg  ggggcgguCGAC ACCU    GAC  UGGUUU cga    u
----     aa            G    --UC   UG      -   aaaa 

Annotation confidence Not enough data

Genome context

XL_group3a: 1435995-1436092 [-]

Mature dps-miR-2548-5p

• Accession: MIMAT0012356
• Description: Drosophila pseudoobscura dps-miR-2548-5p mature miRNA
• Sequence: 22 - UGGUGGAUUAACUGUUGCCA - 41
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2548-3p

• Accession: MIMAT0012357
• Description: Drosophila pseudoobscura dps-miR-2548-3p mature miRNA
• Sequence: 62 - UUUGGUGUCAGCUUCCAGCAGC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9