Stem-loop dps-mir-2562

Accession

MI0011706

Description

Drosophila pseudoobscura dps-mir-2562 precursor miRNA

Sequence

616 reads, 8.0 reads per million, 20 experiments

GCAAGUCAAUAAGAUUAUUCcacaucauuauuguauauggUUAACAUCUUCACUUGAUUUGCAG
(((((((((.(((((....(((.((((....)).)).))).....)))))...)))))))))..

Structure

--         --U     -UAUU   c  -  u 
  GCAAGUCAA   AAGAU     Cca au ca u
  |||||||||   |||||     ||| || ||  
  CGUUUAGUU   UUCUA     ggu ua gu a
GA         CAC     CAAUU   a  u  u 

Annotation confidence Not enough data

Genome context

ref|NC_046681.1|: 8847258-8847321 [+]

Mature dps-miR-2562-5p

• Accession: MIMAT0012386
• Description: Drosophila pseudoobscura dps-miR-2562-5p mature miRNA
• Sequence: 1 - GCAAGUCAAUAAGAUUAUUC - 20
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2562-3p

• Accession: MIMAT0012387
• Description: Drosophila pseudoobscura dps-miR-2562-3p mature miRNA
• Sequence: 41 - UUAACAUCUUCACUUGAUUUGCAG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9