Stem-loop dps-mir-2566a-1

Accession

MI0011710

Description

Drosophila pseudoobscura dps-mir-2566a-1 precursor miRNA

Sequence

auuugcauuuggcUUUAGAAACACAAAGCAUGUGUgguauuuuaacucaUACAUAACUUGUGUCUCUUAGAUcaaaugugagua
((((((((((((((..(((.((((((...(((((((((......)).)))))))...)))))).))).)).)))))))))))).

Structure

-            -  UU   A      AGC       -  au 
 auuugcauuugg cU  AGA ACACAA   AUGUGUg gu  u
 |||||||||||| ||  ||| ||||||   ||||||| ||   
 ugaguguaaacU GA  UCU UGUGUU   UACAUac ca  u
a            A  -U   C      CAA       u  au 

Annotation confidence Not enough data

Genome context

4_group4: 3552319-3552402 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from dps-mir-2566a-1

Mature dps-miR-2566a-1-5p

• Accession: MIMAT0012394
• Description: Drosophila pseudoobscura dps-miR-2566a-1-5p mature miRNA
• Sequence: 14 - UUUAGAAACACAAAGCAUGUGU - 35
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2566a-3p

• Accession: MIMAT0012395
• Description: Drosophila pseudoobscura dps-miR-2566a-3p mature miRNA
• Sequence: 50 - UACAUAACUUGUGUCUCUUAGAU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9