Stem-loop dps-mir-2566a-2

Accession

MI0011712

Description

Drosophila pseudoobscura dps-mir-2566a-2 precursor miRNA

Sequence

aauuugcauuucaaUUUAGAAACACAAAUCAUGUGUgguauguuuuaacucaUACAUAACUUGUGUCUCUUAGAUcaaaugugagu
.((((((((((..(((((((.((((((...(((((((((........)).)))))))...)))))).)).))))).))))))))))

Structure

a          ca     -  A      AUC       -  aug 
 auuugcauuu  aUUUA GA ACACAA   AUGUGUg gu   u
 ||||||||||  ||||| || ||||||   ||||||| ||    
 ugaguguaaa  UAGAU CU UGUGUU   UACAUac ca   u
-          -c     U  C      CAA       u  auu 

Annotation confidence Not enough data

Genome context

4_group4: 3553033-3553118 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from dps-mir-2566a-2

Mature dps-miR-2566a-3p

• Accession: MIMAT0012395
• Description: Drosophila pseudoobscura dps-miR-2566a-3p mature miRNA
• Sequence: 53 - UACAUAACUUGUGUCUCUUAGAU - 75
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2566a-2-5p

• Accession: MIMAT0016970
• Description: Drosophila pseudoobscura dps-miR-2566a-2-5p mature miRNA
• Sequence: 15 - UUUAGAAACACAAAUCAUGUGU - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9