Stem-loop dps-mir-2572

Accession

MI0011721

Description

Drosophila pseudoobscura dps-mir-2572 precursor miRNA

Sequence

6295 reads, 45.0 reads per million, 20 experiments

gcgcugaauuuaaGUAAGCAAGAGAUCGAUCCAUUaagagagcuccuuaacaucauccuaaUGUAUCCUUCUCUUGUUGAUUacagugua
((((((((((......(((((((((..(((.(((((.((((...........)).)).))))).)))..))))))))))))).)))))).

Structure

-      -    uaaGUA         UC   C     a  -  gcuc 
 gcgcug aauu      AGCAAGAGA  GAU CAUUa ga ga    c
 |||||| ||||      |||||||||  ||| ||||| || ||    u
 ugugac UUAG      UUGUUCUCU  CUA GUaau cu cu    u
a      a    ------         UC   U     c  a  acaa 

Annotation confidence Medium

Genome context

ref|NC_046679.1|: 1796669-1796758 [-]

Mature dps-miR-2572-5p

• Accession: MIMAT0012414
• Description: Drosophila pseudoobscura dps-miR-2572-5p mature miRNA
• Sequence: 14 - GUAAGCAAGAGAUCGAUCCAUU - 35
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2572-3p

• Accession: MIMAT0012415
• Description: Drosophila pseudoobscura dps-miR-2572-3p mature miRNA
• Sequence: 62 - UGUAUCCUUCUCUUGUUGAUU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9