Stem-loop dps-mir-2574a

Accession

MI0011723

Description

Drosophila pseudoobscura dps-mir-2574a precursor miRNA

Sequence

5595 reads, 40.0 reads per million, 18 experiments

ugugaaucuuucuuccagguucuuccaauuucUGGACUCUCCAUUUUGUAUUGCGuauacaacaaacgCAAUACAAAAUGGAGAGACCAGaaauuggugguaauaaguuaaca
...((((((.......))))))..(((((((((((.((((((((((((((((((((.........)))))))))))))))))))).)))))))))))................

Structure

ugugaaucuuucuuccagguucuu           A                    aua 
                        ccaauuucUGG CUCUCCAUUUUGUAUUGCGu   c
                        ||||||||||| ||||||||||||||||||||   a
                        gguuaaaGACC GAGAGGUAAAACAUAACgca   a
--------acaauugaauaauggu           A                    aac 

Annotation confidence High

Genome context

ref|NC_046683.1|: 26619922-26620034 [+]

Mature dps-miR-2574a-5p

• Accession: MIMAT0012418
• Description: Drosophila pseudoobscura dps-miR-2574a-5p mature miRNA
• Sequence: 33 - UGGACUCUCCAUUUUGUAUUGCG - 55
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2574a-3p

• Accession: MIMAT0012419
• Description: Drosophila pseudoobscura dps-miR-2574a-3p mature miRNA
• Sequence: 69 - CAAUACAAAAUGGAGAGACCAG - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9