Stem-loop dps-mir-2575

Accession

MI0011726

Description

Drosophila pseudoobscura dps-mir-2575 precursor miRNA

Sequence

ccaaaccgucugcgugugcuucuUUUGUUACUGAUGGUGCUGUCgguccauauucguuaagcCAGCGUCAUCAGUGGCAACAGccgcaccgcaacccaacccccagaagaacgaguaugg
(((.((((((((((.((((..((.((((((((((((((((((.(................).)))))))))))))))))).))..)))))))...............)).))).)).)))

Structure

   a  -   -  ---------------   u    uu  U                  U gguccau 
cca ac cgu cu               gcg gugc  cu UUGUUACUGAUGGUGCUG C       a
||| || ||| ||               ||| ||||  || |||||||||||||||||| |        
ggu ug gca ga               cgc cacg  GA AACGGUGACUACUGCGAC g       u
   a  a   a  agacccccaacccaa   -    cc  C                  c aauugcu 

Annotation confidence Not enough data

Genome context

2: 14879908-14880027 [+]

Mature dps-miR-2575-5p

• Accession: MIMAT0012420
• Description: Drosophila pseudoobscura dps-miR-2575-5p mature miRNA
• Sequence: 24 - UUUGUUACUGAUGGUGCUGUC - 44
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2575-3p

• Accession: MIMAT0012421
• Description: Drosophila pseudoobscura dps-miR-2575-3p mature miRNA
• Sequence: 63 - CAGCGUCAUCAGUGGCAACAG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9