Stem-loop dps-mir-2576-1

Accession

MI0011727

Description

Drosophila pseudoobscura dps-mir-2576-1 precursor miRNA

Sequence

cggcgaucgggucuCUCGAGUGUGGAGAGCAUGGGAguuggcggacacaugagaguuccaccaugaaccucguccagcccacucucaucucauccgcccgcucgagaggucgcgaucguc
.((((((((.(((((((((((((((((((.((((((((.(((((((....(((.((((......))))))))))).))).))))))))))).)))))..)))))))))).).))))))))

Structure

c        g -          --     -   C        u   -    acau   a    ca 
 ggcgaucg g ucuCUCGAGU  GUGGA GAG AUGGGAgu ggc ggac    gag guuc  c
 |||||||| | ||||||||||  ||||| ||| |||||||| ||| ||||    ||| ||||   
 cugcuagc c ggagagcucg  cgccu cuc uacucuca ccg ccug    cuc caag  c
-        g u          cc     a   -        c   a    ----   -    ua 

Annotation confidence Not enough data

Genome context

Unknown_group_319: 10719-10838 [+]

Mature dps-miR-2576

• Accession: MIMAT0012422
• Description: Drosophila pseudoobscura dps-miR-2576 mature miRNA
• Sequence: 15 - CUCGAGUGUGGAGAGCAUGGGA - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9