Stem-loop dsi-mir-303

Accession

MI0011785

Description

Drosophila simulans dsi-mir-303 precursor miRNA

Sequence

augugaucucuugcuUUGGCAUUAAAGGAAGCUAGUUuaauuacgaaaaCUAGUUUCCUCUAACGUUUCAaacaauacaucaugug
(((((((...(((.((((((.(((.(((((((((((((........))))))))))))).))).))..)))))))...))))))).

Structure

-       cuc   c    --  A   A             aau 
 augugau   uug uUUG  GC UUA AGGAAGCUAGUUu   u
 |||||||   ||| ||||  || ||| |||||||||||||    
 uguacua   aac aaAC  UG AAU UCCUUUGAUCaaa   a
g       cau   -    UU  C   C             agc 

Annotation confidence Not enough data

Genome context

chrX: 3275250-3275335 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dsi-mir-303

Mature dsi-miR-303-5p

• Accession: MIMAT0012516
• Description: Drosophila simulans dsi-miR-303-5p mature miRNA
• Sequence: 16 - UUGGCAUUAAAGGAAGCUAGUU - 37
• Evidence: experimental ; Illumina [1-2]

Mature dsi-miR-303-3p

• Accession: MIMAT0037362
• Description: Drosophila simulans dsi-miR-303-3p mature miRNA
• Sequence: 50 - CUAGUUUCCUCUAACGUUUCA - 70
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9


2. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250