Accession
MI0013149
Description
Sus scrofa
ssc-mir-339-1 precursor miRNA
Literature search
7 open access papers mention ssc-mir-339-1
(9 sentences)
(9 sentences)
Sequence
3841011
reads,
2824.0
reads per million, 214 experiments
gcagccgccgUCCCUGUCCUCCAGGAGCUCACUUaccuugggccgUGAGCUCCUCGAGGCCAGAGCCcgugucugccucu
((((.(((.(.(.(((.((((.((((((((((...((...))..)))))))))).)))).))).).).))).))))....
((((.(((.(.(.(((.((((.((((((((((...((...))..)))))))))).)))).))).).).))).))))....
Structure
---- c c U C U C UUa u
gcag cgc g C CUG CCUC AGGAGCUCAC cc
|||| ||| | | ||| |||| |||||||||| || u
cguc gug C G GAC GGAG UCCUCGAGUg gg
ucuc u c C A C C -cc g
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr3: 726710-726789 [+]
Database links
Mature ssc-miR-339-5p
| Accession | MIMAT0013939 |
| Description | Sus scrofa ssc-miR-339-5p mature miRNA |
| Sequence | 11 - UCCCUGUCCUCCAGGAGCUCACUU - 34 |
| Evidence |
experimental
Illumina [1,3-5], cloned [2] |
Mature ssc-miR-339-3p
| Accession | MIMAT0017381 |
| Description | Sus scrofa ssc-miR-339-3p mature miRNA |
| Sequence | 46 - UGAGCUCCUCGAGGCCAGAGCC - 67 |
| Evidence |
experimental
Illumina [3-5] |
References
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