Accession
MI0014502
Description
Arabidopsis lyrata
aly-MIR156a precursor miRNA
Gene family
MIPF0000008;
MIR156
Sequence
182
reads,
6346
reads per million, 1 experiments
ggguugguugugagugaaagaguugggacaagagaaacgcaaagaaacUGACAGAAGAGAGUGAGCACacaaaggcaauuugcauaucauugcauuugcuucucuugcguGCUCACUGCUCUUUCUGUCAGAuuccggugcugaucucuuuggccuguccucgaucucuuugucucaaucucuc
(((..(((..((((..(((((((((((((((((((...(((..(((.(((((((((((((((((((((.(((((((((..((((......)))).))))))...))).))))))))).))).))))))))).)))...)))...)))))......))))).))).))))))..))))))).)))
(((..(((..((((..(((((((((((((((((((...(((..(((.(((((((((((((((((((((.(((((((((..((((......)))).))))))...))).))))))))).))).))))))))).)))...)))...)))))......))))).))).))))))..))))))).)))
Structure
uu ug ug - - ------ aac -aa a - - a --- uu ua ggg ggu ugag aaagag uug ggaca agaga gca gaa cUGACAGAA GAG AGUGAGCAC caa aggcaa ugca u ||| ||| |||| |||||| ||| ||||| ||||| ||| ||| ||||||||| ||| ||||||||| ||| |||||| |||| cuc cua acuc uuucuc agc ccugu ucucu cgu cuu GACUGUCUU CUC UCACUCGug guu uucguu acgu c -u -- ug u u ccgguu agu ggc A U G c cuc -u ua
Annotation confidence
High
Do you think this miRNA is real?
Genome context
GL348716.1: 3693766-3693949 [-]
Database links
Mature aly-miR156a-5p
| Accession | MIMAT0017397 |
| Description | Arabidopsis lyrata aly-miR156a-5p mature miRNA |
| Sequence | 49 - UGACAGAAGAGAGUGAGCAC - 68 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
Mature aly-miR156a-3p
| Accession | MIMAT0017398 |
| Description | Arabidopsis lyrata aly-miR156a-3p mature miRNA |
| Sequence | 111 - GCUCACUGCUCUUUCUGUCAGA - 132 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
References
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