Accession
MI0014516
Description
Arabidopsis lyrata
aly-MIR159b precursor miRNA
Sequence
2303
reads,
80300
reads per million, 1 experiments
ggaagaagaagaggaaGAGCUCCUUGAAGUUCAAUGGaggguuuagcaggguaaaguaaagcugcuaagcuauggaucccauaaaccuuaucaaauucaaaauaaggauuuuuuauggauuccauaucucaggagcuuucacuuaccccuuuaauggcuucacucuucUUUGGAUUGAAGGGAGCUCUUcaucucuaccucc
(((.(.(((.((.((((((((((((..(((((((.(((((((..(((((((..((((((((((.((.((.((((((..(((((((((((((..........))))))....)))))))..)))))).)).)).)))))).))))..))))......)))..))))))).)))))))..)))))))))))).))))).).)))
(((.(.(((.((.((((((((((((..(((((((.(((((((..(((((((..((((((((((.((.((.((((((..(((((((((((((..........))))))....)))))))..)))))).)).)).)))))).))))..))))......)))..))))))).)))))))..)))))))))))).))))).).)))
Structure
a a a g GA U uu ------ ua - g a c uc ---- caaa gga g aga ga gaaGAGCUCCUU AGUUCAA GGagggu agc aggg aagu aaagcu cu ag uaugga ccauaaa ccuuau u ||| | ||| || |||||||||||| ||||||| ||||||| ||| |||| |||| |||||| || || |||||| ||||||| |||||| ccu c ucu cu cUUCUCGAGGGA UUAGGUU cuucuca ucg uccc uuca uuucga ga uc auaccu gguauuu ggaaua u c a - a AG U cu guaauu ca c g c u ua uuua aaac
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
GL348713.1: 7594092-7594293 [+]
Database links
Mature aly-miR159b-5p
| Accession | MIMAT0017425 |
| Description | Arabidopsis lyrata aly-miR159b-5p mature miRNA |
| Sequence | 17 - GAGCUCCUUGAAGUUCAAUGG - 37 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
Mature aly-miR159b-3p
| Accession | MIMAT0017426 |
| Description | Arabidopsis lyrata aly-miR159b-3p mature miRNA |
| Sequence | 169 - UUUGGAUUGAAGGGAGCUCUU - 189 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
References
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