Accession
MI0014518
Description
Arabidopsis lyrata
aly-MIR319a precursor miRNA
Literature search
2 open access papers mention aly-MIR319a
(4 sentences)
(4 sentences)
Sequence
953699
reads,
15121.0
reads per million, 12 experiments
ggauguuguaggaauauauauguagagagagcuuccuugaguccauucacaggucgugauaugauccaauuAGCUUCCGACUCAUUCAUCCAaauaccgagucgccaaaauucgaacuagacucguuaaaugAAUGAAUGAUGCGGUAGACAAAUuggaucauugauucucuuugauuggacugaagggagcucccucucucuucuguauuccaauugucu
((((...((.((((((((...(.(((((((((((((((.((((((.(((.(((..((.(.(((((((((((.(((.(((..((((((((.((..((.((((((................)))))).))..)).))))))))..))).)).).)))))))))))).))..))).))).)))))).))))))))))..))))))...)))))))).)).))))
((((...((.((((((((...(.(((((((((((((((.((((((.(((.(((..((.(.(((((((((((.(((.(((..((((((((.((..((.((((((................)))))).))..)).))))))))..))).)).).)))))))))))).))..))).))).)))))).))))))))))..))))))...)))))))).)).))))
Structure
guu a uau u -- g u c uc g u A - U AC C aa c gccaaaa
ggau gu ggaauaua g agaga gagcuuccuu agucca uca agg gu a augauccaauu G CU CCG UCAUUCAU CA ua cgaguc u
|||| || |||||||| | ||||| |||||||||| |||||| ||| ||| || | ||||||||||| | || ||| |||||||| || || ||||||
ucug ua ccuuaugu c ucucu cucgagggaa ucaggu agu ucu ua u uacuagguUAA C GA GGC AGUAAGUA gu au gcucag u
--u a cuu - cc g u u cu g - A A U GU A aa u aucaagc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
GL348719.1: 7941288-7941508 [-]
Database links
Mature aly-miR319a-5p
| Accession | MIMAT0017429 |
| Description | Arabidopsis lyrata aly-miR319a-5p mature miRNA |
| Sequence | 72 - AGCUUCCGACUCAUUCAUCCA - 92 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR319a-3p
| Accession | MIMAT0017430 |
| Description | Arabidopsis lyrata aly-miR319a-3p mature miRNA |
| Sequence | 133 - AAUGAAUGAUGCGGUAGACAAAU - 155 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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