Accession
MI0014518
Description
Arabidopsis lyrata
aly-MIR319a precursor miRNA
Sequence
1
reads,
35
reads per million, 1 experiments
ggauguuguaggaauauauauguagagAGAGCUUCCUUGAGUCCAUUCacaggucgugauaugauccaauuagcuuccgacucauucauccaaauaccgagucgccaaaauucgaacuagacucguuaaaugaaugaaugaugcgguagacaaauuggaucauugauucucuuugaUUGGACUGAAGGGAGCUCCCUcucucuucuguauuccaauugucu
((((...((.((((((((...(.(((((((((((((((.((((((.(((.(((..((.(.(((((((((((.(((.(((..((((((((.((..((.((((((................)))))).))..)).))))))))..))).)).).)))))))))))).))..))).))).)))))).))))))))))..))))))...)))))))).)).))))
((((...((.((((((((...(.(((((((((((((((.((((((.(((.(((..((.(.(((((((((((.(((.(((..((((((((.((..((.((((((................)))))).))..)).))))))))..))).)).).)))))))))))).))..))).))).)))))).))))))))))..))))))...)))))))).)).))))
Structure
guu a uau u -- G U c uc g u a - u ac c aa c gccaaaa
ggau gu ggaauaua g agagA GAGCUUCCUU AGUCCA UCa agg gu a augauccaauu g cu ccg ucauucau ca ua cgaguc u
|||| || |||||||| | ||||| |||||||||| |||||| ||| ||| || | ||||||||||| | || ||| |||||||| || || ||||||
ucug ua ccuuaugu c ucucU CUCGAGGGAA UCAGGU agu ucu ua u uacuagguuaa c ga ggc aguaagua gu au gcucag u
--u a cuu - CC G U u cu g - a a u gu a aa u aucaagc
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348719.1: 7941288-7941508 [-]
Database links
Mature aly-miR319a-5p
| Accession | MIMAT0017429 |
| Description | Arabidopsis lyrata aly-miR319a-5p mature miRNA |
| Sequence | 28 - AGAGCUUCCUUGAGUCCAUUC - 48 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR319a-3p
| Accession | MIMAT0017430 |
| Description | Arabidopsis lyrata aly-miR319a-3p mature miRNA |
| Sequence | 177 - UUGGACUGAAGGGAGCUCCCU - 197 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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