Accession
MI0014534
Description
Arabidopsis lyrata
aly-MIR166c precursor miRNA
Sequence
114
reads,
3975
reads per million, 1 experiments
gguugagaGGAAUGUUGUCUGGCUCGAGGucaugaaggagaggauaucacuccaauuaauuuggaagaacgaauuaagaaacccuaaaugauucUCGGACCAGGCUUCAUUCCCCcuaacc
(((((.(.((((((..((((((.((((((((((..(((...(((......)))..((((((((......)))))))).....)))..)))).)))))).))))))..)))))).).)))))
(((((.(.((((((..((((((.((((((((((..(((...(((......)))..((((((((......)))))))).....)))..)))).)))))).))))))..)))))).).)))))
Structure
a a UU C - ga agaggauaucacuccaa ga
gguug g GGAAUG GUCUGG UCGAGG ucau agg uuaauuug a
||||| | |||||| |||||| |||||| |||| ||| ||||||||
ccaau C CCUUAC CGGACC GGCUcu agua ucc aauuaagc g
c C UU A u aa ------------caaag aa
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348718.1: 3626989-3627109 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from aly-MIR166c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aly-miR166c-5p
| Accession | MIMAT0017463 |
| Description | Arabidopsis lyrata aly-miR166c-5p mature miRNA |
| Sequence | 9 - GGAAUGUUGUCUGGCUCGAGG - 29 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR166c-3p
| Accession | MIMAT0017464 |
| Description | Arabidopsis lyrata aly-miR166c-3p mature miRNA |
| Sequence | 95 - UCGGACCAGGCUUCAUUCCCC - 115 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
References
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